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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919002.1_cds_XP_016468292.1_60947
CDS Infomation

[gene=LOC107790846] [db_xref=GeneID:107790846] [protein=E3 ubiquitin-protein ligase At1g12760-like isoform X2] [protein_id=XP_016468292.1] [location=complement(join(84600..84770,84870..85034,86012..86144,86251..86373,87037..87518))] [gbkey=CDS]
Sequence

ATGTTTTCACCCAGTTCATCAAATTCACCATTACTAAGATCCAACGAAAGCGATGAATCC
TTTCACCTGCGATCACCTCGTCGGCATAGCCTTCGAGAGGCAATTCGGGTATTCCAAAGA
GCCAGCAACAGAAGTGGGTTAATGATGCGTGAACCGTCTGATCAGCAAATCAATGATAGG
CAAAGTAATTGGGCTTACTCTAAGCCCGTTGTGATTATTGACCTCCTATGGAACTTTGCA
TACATCATTGTTGCGTGTTTTGTCTTATTCTTCAGTAGAGAAGAAGACCCAGAAATGCCT
TTGAGGATTTGGATTGTTGGCTACTCTTTGCTTTGCCTGCTTCATATTGTTTGTGTTTTT
TTGGAGTATCGGAGAAGAGGATATGGTCAATCGGCGGAGGAGGCATTTGGGAGCTCTGCT
GAGGGTTCGAGGGGGTCTAGTGGTTATGTTACTTTGGCTGAATTAACCCCCGAAAGATCA
AGTAACATGGCGAAGTATATGGATTCTGCAAATACAATGTTATCATTCCTCTGGTGGATC
ATTGGATTTTATTGGGTATGTATTGGTGGGCAGCGGATGGTACAAGAATCCCCTCAATTA
TACTGGCTTTGCATTGTTTTCTTGGCTTTTGATGTATTCTTTGTGGTCTTCTTAATTACG
TTGGCTTGTGCTGTTGGTCTCGGAATCTGCTGTTGCCTTCCATGTATTATTGCTGTTCTA
TATGCTGTAGCTGATCAGAAAGGAGCTAACAAAGAAGATATTGAACAACTGTCAAAGTAC
ATTTTCCGACACAATGGCGTTAATGAGAATCGGACTGGTGAGATCCAAGGGACATTTGCT
GGATTCATGACCCAGTGCGGGACAGATACACCCAAGGAGCACTCACTTTCCACAGATGAT
GCTGCATGTTCCATATGTCTCTCTACTTATGATGATGGAGAAGAACTCCGAGAACTTCCC
TGTGGTCACCATTTTCACTGTGCTTGTATTGACAAATGGCTATATATGAGTGCAACCTGT
CCCCTTTGCAAGCGCAGCATCGTTGGGACTAGCTGTTGCAGTGAAGAAGTTTAG

Peptide Sequence

PEP ID

XP_016468292.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2 [Nicotiana tabacum]
Sequence

MFSPSSSNSPLLRSNESDESFHLRSPRRHSLREAIRVFQRASNRSGLMMREPSDQQINDR
QSNWAYSKPVVIIDLLWNFAYIIVACFVLFFSREEDPEMPLRIWIVGYSLLCLLHIVCVF
LEYRRRGYGQSAEEAFGSSAEGSRGSSGYVTLAELTPERSSNMAKYMDSANTMLSFLWWI
IGFYWVCIGGQRMVQESPQLYWLCIVFLAFDVFFVVFLITLACAVGLGICCCLPCIIAVL
YAVADQKGANKEDIEQLSKYIFRHNGVNENRTGEIQGTFAGFMTQCGTDTPKEHSLSTDD
AACSICLSTYDDGEELRELPCGHHFHCACIDKWLYMSATCPLCKRSIVGTSCCSEEV

Transcript Sequence

Gene sequence data has not been registered.